Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015848139.1_cds_XP_016510300.1_23152
CDS Infomation

[gene=LOC107827638] [db_xref=GeneID:107827638] [protein=uncharacterized protein LOC107827638] [protein_id=XP_016510300.1] [location=join(25791..27153,27544..27728,28606..28829,29737..30523)] [gbkey=CDS]
Sequence

ATGGGTTGCACGGCGTCGAAGCTAGATAACGAGGACACTGTCCGGAGGTGTAAAGAACGC
CGGCGATTGATGAAAGAAGCTGTTTACGCTCGTCATCATTTAGCTTCAGCTCATTCCGAT
TACTGCCGTTCACTCCGTATCACCGGTTCTGCTCTTTCCACCTTCGCCGCCGGTGAACCT
CTTTCCGTTTCCGATCATACCCCCGCCGTCCTCCTCCGTACACCCTCTACTACTACCACC
ACCGTTAAAACCCCAGCTCCACCACCTCCTGTTCGTATCCCATCCCCCTCACCTTCACTC
CACCCACCACCACCGCCGCCGGCATTTTCTCCGTCTCCGTCACCGACGATAGCTTCATCA
AAGCTACCTCACATACTTTCTTCCTCCTCTGTTTCCTCCCACCACAACCACCACCACCGT
CAGCCTCAGCCGTTACAACAACGGAAAAAACCCGTAAAACTTCCACACATTCTTTCGGGA
TCAAGCTTGAGTTCATACAATGAGGAGGATTATACGTACGATGCGAAAGCGAATTCGACG
TATTCGAGTACTCCTTCACAAACTTCCTCTGTTTGGAACTGGGAAAACTTTTACCCTCCT
TCCCCTCCTAGCTCAGATTACTTTGAACGCCTCCGTAAAGTGGACACAATGGATGCTGAC
GATGAGCATGATGATGATAAAGCTTCAAACTTTACATCTTATTCACACTACTCTCAGCAT
CAGCATCCTACTACTGACCAATCATCACTTAGTGGGAAATCGCACAAGCAAAAGTTTGAT
TTTTTCGATAGTCATAGTGTTGATGATGAGAAGTTGACTAATGGGTCTGTTAGGAATCAC
AAAATGGTGGGTGAAAACAAGAGAGGTCACCATTTGAATAATAATAGCAAGTGGGAGGAT
AGTGAAGCTGAGAGAGAAGAGGTACAGTGCAGTGAATGGGACCATGATCATTATAGTACT
ACGAGTTCATCTTCTGATGATGATGAAGAGGAAGAAAAGGATGAGATAAGATCTGGGTTT
GGGCCAACCCGGTCTAATTTTGGGTCAATGAAGAGTGAGGAAGCTTCTAAGATTGGTGAT
GTCAATTTGAGGATGAAGAGTTATTCAGGGAGGAAATCGGATAAGGTATCGTCGGAGGAT
GGAGGGTCGTCTTCGATGAGTTGGGGGAATGGGAATAATGGGAAAGTGGTGGAGGAGATG
GTATCTGATAATAGGAGTATAGTGGTGAGGCACAAGGATCTAGCTGAGATTGTTGCTGCC
ATTAGGGACTACTTTGATAAAGCTGCTTCTGCTGGTGACCAGGTCTCTGAGATGTTGGAG
ACTGGCCGAGCTCAGCTTGATCGCAGCTTTAAGCAGTTAAAGAAAACAGTGTATCATTCC
AGTGGAGTATTTAGTACCATAAGCTCCACTTGGTCTTCAAAACCTCCACTGGCCGTCAAG
TATCGTTTTGAACCTAGTTCCATTGATGAACCAGGTTCCCAAAAGAGTCTTTGTTCCACC
TTGGAGCGACTCTTGGCATGGGAAAAGAAACTATATCAGGAAGTGAAGGCAAGGGAAGGA
GTTAAAATTGAGCATGAAAAGAAGTTGGCAACATTACAGAGTCAAGAATGCAGAGGTGAT
GAGGAAGCCAAGTTGGACAAAACCAAGGCCTCAATAAAGAGGTTGCAGTCGCTGATGGTG
GTCACATCGCAGGCTGTTTCGACTACGTCCTCTGCCATTATTGGTCTAAGAGACTCTGAC
CTTGTCCCACAGCTTGTTGAACTTTGTCATGGATTCATGTACATGTGGAGATCCATGAAC
CAGTTCCATGAAGTTCAGAATGACATTGTGCAGCAGGTGCGAGGTCTCATCAATAGAGCA
ACTAAAGGTCTATCAACGTCTGACCTACACAGGCAGGCGACACGTGATCTTGAGTCTGCT
GTATCTGCATGGCACTCGAGTTTTTGTCGCCTCATAAAATTTCAAAGGGACTTTATCCGC
TCCCTTCATGGTTGGTTCAAGCTCACTCTTGTATCTGTCAATATTGAGCCAACTAATTGC
AACAGAGAACCTTCAGATTCATTTATGTTTTGCGATGAATGGAAGCTAGCCCTTGACCGT
ATTCCTGACACTGTTGCATCAGAAGCTATCAAAAGCTTCATAAACGTTGTCCATTCGATA
TTTGTGAAACAAACGGAGGAGTTGAAGATCAAAAAACGAACTGAATCTGCATCAAAGGAG
CTTGAGAAAAAGGCTTCGAGTGTTAGGAGCATTGAGAGGAAGTATTACAACTCTTACTCC
ATGGTTGGCATTGGACTTCCTGAGATGGGACCTGATAATGGTAGTGTTTTAGATACACGA
GACCCTCTTGCTGAGAAAAAGGCTGAGCTTGCAGCTAGCCAACGGCGTGTGGAAGATGAG
ATGCTGAAGCACTCCAAGGCAGTGGACGTAACCAGAGCGATGACTCTCAACAACATTCAG
ACAGGGTTGCCGGGAGTTTTCCAGGCCATGACCAGCTTTTCTTCCTTGATGACAGAGGCC
CTTGAGGCTGTATGCACTCATTCTTATGCTATTAAGTAG

Peptide Sequence

PEP ID

XP_016510300.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107827638 [Nicotiana tabacum]
Sequence

MGCTASKLDNEDTVRRCKERRRLMKEAVYARHHLASAHSDYCRSLRITGSALSTFAAGEP
LSVSDHTPAVLLRTPSTTTTTVKTPAPPPPVRIPSPSPSLHPPPPPPAFSPSPSPTIASS
KLPHILSSSSVSSHHNHHHRQPQPLQQRKKPVKLPHILSGSSLSSYNEEDYTYDAKANST
YSSTPSQTSSVWNWENFYPPSPPSSDYFERLRKVDTMDADDEHDDDKASNFTSYSHYSQH
QHPTTDQSSLSGKSHKQKFDFFDSHSVDDEKLTNGSVRNHKMVGENKRGHHLNNNSKWED
SEAEREEVQCSEWDHDHYSTTSSSSDDDEEEEKDEIRSGFGPTRSNFGSMKSEEASKIGD
VNLRMKSYSGRKSDKVSSEDGGSSSMSWGNGNNGKVVEEMVSDNRSIVVRHKDLAEIVAA
IRDYFDKAASAGDQVSEMLETGRAQLDRSFKQLKKTVYHSSGVFSTISSTWSSKPPLAVK
YRFEPSSIDEPGSQKSLCSTLERLLAWEKKLYQEVKAREGVKIEHEKKLATLQSQECRGD
EEAKLDKTKASIKRLQSLMVVTSQAVSTTSSAIIGLRDSDLVPQLVELCHGFMYMWRSMN
QFHEVQNDIVQQVRGLINRATKGLSTSDLHRQATRDLESAVSAWHSSFCRLIKFQRDFIR
SLHGWFKLTLVSVNIEPTNCNREPSDSFMFCDEWKLALDRIPDTVASEAIKSFINVVHSI
FVKQTEELKIKKRTESASKELEKKASSVRSIERKYYNSYSMVGIGLPEMGPDNGSVLDTR
DPLAEKKAELAASQRRVEDEMLKHSKAVDVTRAMTLNNIQTGLPGVFQAMTSFSSLMTEA
LEAVCTHSYAIK

Transcript Sequence

Gene sequence data has not been registered.